Amazonia landscape and species evolution pdf




















Implications for the Illimani ice core interpretation. Vuille, M. Stable isotopes in precipitation recording South American summer monsoon and ENSO variability—observations and model results. Salati, E. Recycling of water in the Amazon basin: an isotopic study.

Water Resour. Gat, J. Atmospheric water balance in the Amazon basin: an isotopic evapotranspiration model. Victoria, R. Mechanisms of water recycling in the Amazon basin: isotopic insights. Ambio 20 , — Google Scholar. Interannual variability and climatic controls. Reuter, J. A new perspective on the hydroclimate variability in Northern South America during the little ice age.

Bird, B. A year-long annually resolved record of the South American summer monsoon from the Peruvian Andes. Natl Acad. USA , — Kanner, L. Wang, Y. Millennial-and orbital-scale changes in the East Asian monsoon over the past , years. Nature , — Svensson, A. A 60, year Greenland stratigraphic ice core chronology. Past 4 , 47—57 Peterson, L. Rapid changes in the hydrologic cycle of the tropical Atlantic during the last glacial.

Cruz, F. Insolation driven changes in atmospheric circulation over the past , years in subtropical Brazil. Nature , 63—66 Wang, X. Interhemispheric anti-phasing of rainfall during the last glacial period. Northeastern Brazil wet periods linked to distant climate anomalies and rainforest boundary changes. Orbitally driven east—west antiphasing of South American precipitation.

Baker, P. The history of South American tropical precipitation for the past 25, years. Cheng, H. The Global Paleomonsoon as seen through speleothem records from Asia and the Americas.

Kutzbach, J. Simulation of the evolutionary response of global summer monsoons to orbital forcing over the last , years. Sylvestre, F. Moisture pattern during the last glacial maximum in South America. Past climate variability in South America and surrounding regions. Paleoenvironment Res. Sturm, C. Intraseasonal variability in South America recorded in stable water isotopes. Lenters, J. On the origin of the Bolivian high and related circulation features of the South American climate.

Severinghaus, J. Oxygen of O2 records the impact of abrupt climate change on the terrestrial biosphere. Hoffmann, G. Coherent isotope history of Andean ice cores over the last century.

Garreaud, R. Present-day South American climate. Clement, A. The importance of precessional signals in the tropical climate. Mayle, F. Impact of a drier early-mid Holocene climate upon Amazonian forests. B , — Haffer, J. Speciation in amazonian forest birds. Geographical patterns for relict and young species of birds in Africa and South America and implications for conservation priorities. Moritz, C. Diversification of rainforest faunas: an integrated molecular approach.

Sick, H. Willis, E. Zoogeographical origins of eastern. Brazilian birds. Costa, L. The historical bridge between the Amazon and the Atlantic Forest of Brazil: a study of molecular phylogeography with small mammals.

Behling, H. Late Quaternary vegetation and climate dynamics in northeastern Brazil: inferences from marine core GeoB Oliveira, P. Millennial-scale dynamics of southern Amazonian rain forests. Ricklefs R. Biotic development of quaternary Amazonia: a palynological perspective. Mayle, F. Impact of a drier Early—Mid-Holocene climate upon Amazonian forests.

Responses of Amazonian ecosystems to climatic and atmospheric carbon dioxide changes since the last glacial maximum. McCormack, J. Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays. Evolution, 65 , — Applications of next-generation sequencing to phylogeography and phylogenetics. Molecular Phylogenetics and Evolution. Miller, K. The Phanerozoic record of global sea-level change. Mittelbach, G. Evolution and the latitudinal diversity gradient: speciation, extinction and biogeography.

Ecology Letters, 10 , — Moore, W. Inferring phylogenies from mtDNA variation: mitochondrial-gene trees versus nuclear-gene trees. Evolution, 49 , — Mora, A. Tectonic history of the Andes and sub-Andean zones: implications for the development of the Amazon drainage basin.

Moritz, C. Strategies to protect biological diversity and the evolutionary processes that sustain it. Systematic Biology, 51 , — Comparative phylogeography and the identification of genetically divergent areas for conservation.

Diversification of rainforest faunas: an integrated molecular approach. Annual Review of Ecology and Systematics, 31 , — Nelson, B. Endemism centres, refugia and botanical collection density in Brazilian Amazonia. Nielsen, R. Statistical inferences in phylogeography. Noonan, B. Phylogeography and demography of Guianan harlequin toads Atelopus : diversification within a refuge. Refugial isolation and secondary contact in the dyeing poison frog Dendrobates tinctorius. Molecular Ecology, 15 , — Neotropical diversification: the effects of a complex history on diversity within the poison frog genus Dendrobates.

Journal of Biogeography, 33 , — Nordborg, M. Coalescent theory. Balding, M. Cannings Eds. Chichester: Wiley. Nores, M. An alternative hypothesis for the origin of Amazonian bird diversity. Journal of Biogeography, 26 , — Ogden, R. Molecular evidence for ecological speciation in tropical habitats. Orr, M. Ecology and speciation. Trends in Ecology and Evolution, 13 , — Patterson, B. Patterns and trends in the discovery of new Neotropical mammals.

Diversity and Distributions, 6 , — Patton, J. Rivers, refuges, and ridges. The geography of speciation of Amazonian mammals. Berlocher Eds. New York: Oxford University Press. Molecular phylogenetics and the diversification of Amazonian mammals. Vieira, J. Silva, D. D'Incao Eds. MtDNA phylogeny of Andean mice: a test of diversification across ecological gradients.

Evolution, 46 , — Gene genealogy and differentiation among arboreal spiny rats Rodentia, Echimyidae of the Amazon Basin: a test of the riverine barrier hypothesis.

Evolution, 48 , — Bulletin of the American Museum of Natural History, 1— Pearse, D. Beyond F ST : analysis of population genetic data for conservation. Conservation Genetics, 5 , — Pennington, R. Diversification of the Amazonian flora and its relation to key geological and environmental events: a molecular perspective. Peres, C. Riverine barriers and gene flow in Amazonian saddle-back tamarins. Folia Primatologica, 67 , — Biodiversity conservation in human-modified Amazonian forest landscapes.

Biological Conservation, , — Pons, D. Neogene woods from western Peruvian Amazon and palaeoenvironmental interpretation. Bulletin of Geosciences, 82 , — Prance, G. Biological diversification in the Tropics. The changing forests. Provan, J. Phylogeographic insights into cryptic glacial refugia.

Trends in Ecology and Evolution, 23 , — Puritz, J. Next-generation phylogeography: a targeted approach for multilocus sequencing of non-model organisms. Phylogeographic patterns of trans-Amazonian vicariants and Amazonian biogeography: the Neotropical rattlesnake Crotalus durissus complex as an example.

Journal of Biogeography, 34 , — Fluvial perturbance in the western Amazon Basin: regulation by long-term sub-Andean tectonics. Evolution of the western Amazon lowland relief: impacts of Andean foreland dynamics. Terra Nova, 2 , — Late Miocene tidal deposits in the Amazonian foreland basin. Renner, S. Import and export of biological samples from tropical countriesconsiderations and guidelines for research teams.

Organisms Diversity and Evolution, 12 , 81— Ribas, C. A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years.

Richards, C. Distribution modelling and statistical phylogeography: an integrative framework for generating and testing alternative biogeographical hypotheses. Riddle, B. The role of molecular genetics in sculpting the future of integrative biogeography. Progress in Physical Geography, — Roberts, J. Genetic divergence and speciation in lowland and montane peruvian poison frogs.

Molecular Phylogenetics and Evolution, 41 , — Rapid diversification of colouration among populations of a poison frog isolated on sky peninsulas in the central cordilleras of Peru. Roddaz, M. Cenozoic sedimentary evolution of the Amazonian foreland basin system.

Rodrigues, M. The conservation of Brazilian reptiles: challenges for a megadiverse country. Conservation Biology, 19 , — Rossetti, D. Evolution of the lowest amazon basin modeled from the integration of geological and SRTM topographic data. New geological framework for western Amazonia Brazil and implications for biogeography and evolution. Quaternary Research, 63 , 78— Rull, V. Speciation timing and neotropical biodiversity: the TertiaryQuaternary debate in the light of molecular phylogenetic evidence.

Neotropical biodiversity: timing and potential drivers. Trends in Ecology and Evolution, 26 , — Salati, E. The climatology and hydrology of Amazonia. Salgado-Labouriau, M. Late Quaternary palaeoclimate in the savannas of South America. Journal of Quaternary Science, 12 , — Salo, J. River dynamics and the diversity of Amazon lowland forest.

Sepulchre, P. Modelling the response of Amazonian climate to the uplift if the Andean mountain range. Sick, H. Lent Ed. Rio de Janeiro: Conselho de Pesquisas. Silva, J. The fate of the Amazonian areas of endemism. Sioli, H. The Amazon and its main affluents: hydrography, morphology of the rivers courses, and river types. Sioli Ed. Dordrecht: Junk. Smith, T. A role for ecotones in generating rainforest biodiversity.

Biodiversity hotspots and beyond: the need for preserving environmental transitions. Trends in Ecology and Evolution, 16 , Solomon, S. Paleodistributions and comparative molecular phylogeography of leafcutter ants Atta spp. Sunnucks, P. Efficient genetic markers for population biology. Trends in Ecology and Evolution, 15 , — Symula, R.

Molecular systematics and phylogeography of Amazonian poison frogs of the genus Dendrobates. Molecular Phylogenetics and Evolution, 26 , — Thompson, L. Journal of Quaternary Science, 15 , — Thomson, R. Genome-enabled development of DNA markers for ecology, evolution and conservation. Valente, C. Fluvial archive of peculiar avulsive fluvial patterns in the largest Quaternary intracratonic basin of tropical South America: the Bananal Basin, Central-Brazil. Palaeogeography, Palaeoclimatology, Palaeoecology, — , 62— Neogene and Quaternary history of vegetation, climate, and plant diversity in Amazonia.

Red- and yellow-footed tortoises, Chelonoidis carbonaria and C. Organisms Diversity and Evolution, 10 , — Vonhof, H. Climate variation in Amazonia during the Neogene and the Quaternary. Wiley—Blackwell: Chichester. Reconstruction of the Miocene western Amazonian aquatic system using molluscan isotopic signatures. Palaeogeography, Palaeoclimatology, Palaeoecology, , 85— Wakeley, J.

Recent trends in population genetics: more data! Journal of Heredity, 95 , — Coalescent theory: an introduction. Greenwood Village: Roberts. Wallace, A. On the monkeys of the Amazon. Proceedings of the Zoological Society of London, 20 , — Wanderley-Filho, J.

Webb, S. Biological implications of the middle Miocene Amazon seaway. Werneck, F. The diversification of eastern South American open vegetation biomes: historical biogeography and perspectives. Quaternary Science Reviews, 30 , — Revisiting the historical distribution of Seasonally Dry Tropical Forests: new insights based on palaeodistribution modelling and palynological evidence.

Global Ecology and Biogeography, 20 , — Deep diversification and long-term persistence in the South American 'dry diagonal': integrating continent-wide phylogeography and distribution modeling of geckos.

Evolution, 66 , — Climatic stability in the Brazilian Cerrado: implications for biogeographical connection of South American savannas, species richness, and conservation in a biodiversity hotspot. Journal of Biogeography, 39 , — Wesselingh, F. A Miocene perspective on the evolution of the Amazonian biota.

Scripta Geologica, , — On the origin of Amazonian landscapes and biodiversity: a synthesis. Chichester: Wiley—Blackwel. Whitmore, T. Biogeography and Quaternary history in Tropical America. Wiens, J. The causes of species richness patterns across space, time, and clades and the role of "ecological limits".

Quarterly Review of Biology, 86 , 75— Evolutionary and ecological causes of the latitudinal diversity gradient in hylid frogs: treefrog trees unearth the roots of high tropical diversity. The American Naturalist, , — Wilkins, J. The coalescent in a continuous, finite, linear population. Wilkinson, M. Megafan environments in northern South America and their impact on Amazon Neogene aquatic ecosystems. Tracing an invasion: landbridges, refugia, and the phylogeography of the Neotropical rattlesnake Serpentes: Viperidae: Crotalus durissus.

Zachos, J. Trends, rhythms, and aberrations in global climate 65 Ma to present. Zink, R. Mitochondrial DNA under siege in avian phylogeography. Download references. Support for this work was provided to R. Additional support to R. We thank Margaret Byrne and Dorothy Steane for providing a modified version of the timeline scheme depicted on Fig. We also are thankful to Fernanda Werneck for assistance with the map and useful comments on previous versions of the manuscript.

We thank two anonymous reviewers for helpful comments on the manuscript. Monte L. You can also search for this author in PubMed Google Scholar. Correspondence to Rafael N. Reprints and Permissions. Leite, R. Revisiting Amazonian phylogeography: insights into diversification hypotheses and novel perspectives.

Org Divers Evol 13, — Further processing of subsurface data, both seismic as well The palynological and palaeobotanical record of plants shows as borehole data and samples, will add to our knowledge of the us that modern angiosperm-dominated rainforests existed in development of the region and its landscapes. Study of the reac- Amazonia throughout the Cenozoic see Chapter 19 by Jaramillo tion of biodiversity to previous natural perturbations will bring et al.

Diversity culminated during the Eocene, and a major more insights about ecosystem resilience, at a time when such extinction occurred at the Eocene—Oligocene transition. Modern insights are so badly needed. With this book we hope to enhance Finally, we are immensely thankful that Thomas van der appreciation of the vast timescales that were needed to create Hammen managed to complete the prologue of this book, this these great ecosystems, which we are challenging so profoundly at in spite of his deteriorating health.

Thomas has been our mentor, this moment in history. We dedicate this volume to him in admiration of his longstanding commitment to Amazonian research, and hope that this book will inspire young Acknowledgements scientists to undertake further research, just as Thomas inspired us to engage in research in wonderful Amazonia. There is still This book is the result of an intense cooperative effort of more so much to research out there in the virgin rainforest of South than a hundred people from different continents who all share America.

As edi- tors we were overwhelmed by the enthusiasm of all our colleagues who participated in this project. The novel and original insights References presented through the chapter authors and reviewers encouraged us at all times. In: Prance, C. Biological Diversification in the always joined us together. The compilation of this book has been Tropics.

New York: Columbia University Press, pp. Suguio, K. However, this book would not have T. Paris , — Antonelli, A. Doctoral thesis. J Biogeog 34, Quaternary Sci Rev 19, — Amazoniana 16, — But above all we owe them special thanks for stand- erosion. Palaeogeogr Palaeocli , — Geology 37, — Science , — Amazonia during the Cenozoic: On the refuge theory of biotic None of this would have ever happened, though, if Ian Francis differentiation.

We thank him for his trust and also thank Delia Quaternary development of the neotropical rain forest: the forest Sandford and Kelvin Matthews, also from the publishing house, refugia hypothesis, and a literature overview. Earth-Sci Rev 44, and project manager, Nik Prowse, for their patience, help and — Hoorn, C.

Palaeogeogr Palaeocl , 1— Wickardt, respectively who enabled us to complete the process of Hovikoski, J. Our families have born most of the brunt sedimentological and ichnological data. PhD thesis, Annales of our work. Wesselingh Amazon and how many of them will go extinct?

Yli-Halla, M. J Trop Ecol 23, 13— Kalliola, R. Annales River dynamics and the diversity of Amazon lowland forest. Turku: of a Mighty Tropical River and its Basin. Dordrecht, Boston, University of Turku. Hingham, MA: W. Lovejoy, N. Nature , — Topics in Biogeology, vol. In: carbon sequestration in the tropical North Atlantic Ocean. Porto Alegre: Edipucrs, Sugden, D. J Quaternary Sci Special Issue 15, — Morley, R.

New Tuomisto, H. J Biogeogr 34, — Nelson, B. Nores, M. J Biogeogr 26, —



0コメント

  • 1000 / 1000